Invocation

To start using scSpotlight, please use the command below and access the app via: 127.0.0.1:8081

scSpotlight::run_app(options = list(port = 8081, host = "0.0.0.0"))

The default mode of app is processing. User could also change mode to viewer, which will only allow illustrating dataset and querying gene expressions:

scSpotlight::run_app(options = list(port = 8081, host = "0.0.0.0"), runningMode = "viewer")

If one needs to load a very large dataset, use dataDir parameter to mount data directory and load Rds file directly.

scSpotlight::run_app(options = list(port = 8081, host = "0.0.0.0"), runningMode = "viewer", dataDir = "/path/to/data_directory")